Taxonomy of DNA conformations within complex nucleoprotein assemblies

Dorothy Buck; Kenneth Lee Baker

doi:10.1143/PTPS.191.55

Taxonomy of DNA conformations within complex nucleoprotein assemblies

Dorothy Buck, Kenneth Lee Baker

Mathematics

Research output: Contribution to journal › Article

2 Scopus citations

Abstract

Here we discuss the paradigms both for modelling complex nucleoprotein assemblies as rational tangles, and the associated enzymatic action as rational subtangle replacement. We harness the correspondence between specific curves on the boundary of a rational tangle and on the boundary of its branched double cover to classify rational tangles of distance d = 2 from a given rational tangle, in turn limiting the underlying DNA geometry.

Original language	English (US)
Pages (from-to)	55-65
Number of pages	11
Journal	Progress of Theoretical Physics Supplement
Issue number	191
DOIs	https://doi.org/10.1143/PTPS.191.55
State	Published - 2011

ASJC Scopus subject areas

Physics and Astronomy (miscellaneous)

Access to Document

10.1143/PTPS.191.55

Fingerprint Dive into the research topics of 'Taxonomy of DNA conformations within complex nucleoprotein assemblies'. Together they form a unique fingerprint.

Cite this

Buck, D., & Lee Baker, K. (2011). Taxonomy of DNA conformations within complex nucleoprotein assemblies. Progress of Theoretical Physics Supplement, (191), 55-65. https://doi.org/10.1143/PTPS.191.55

@article{bdc495e07a26435fa6f2eda523518326,

title = "Taxonomy of DNA conformations within complex nucleoprotein assemblies",

abstract = "Here we discuss the paradigms both for modelling complex nucleoprotein assemblies as rational tangles, and the associated enzymatic action as rational subtangle replacement. We harness the correspondence between specific curves on the boundary of a rational tangle and on the boundary of its branched double cover to classify rational tangles of distance d = 2 from a given rational tangle, in turn limiting the underlying DNA geometry.",

author = "Dorothy Buck and {Lee Baker}, Kenneth",

year = "2011",

doi = "10.1143/PTPS.191.55",

language = "English (US)",

pages = "55--65",

journal = "Progress of Theoretical Physics Supplement",

issn = "0375-9687",

publisher = "Yukawa Institute for Theoretical Physics",

number = "191",

}

TY - JOUR

T1 - Taxonomy of DNA conformations within complex nucleoprotein assemblies

AU - Buck, Dorothy

AU - Lee Baker, Kenneth

PY - 2011

Y1 - 2011

N2 - Here we discuss the paradigms both for modelling complex nucleoprotein assemblies as rational tangles, and the associated enzymatic action as rational subtangle replacement. We harness the correspondence between specific curves on the boundary of a rational tangle and on the boundary of its branched double cover to classify rational tangles of distance d = 2 from a given rational tangle, in turn limiting the underlying DNA geometry.

AB - Here we discuss the paradigms both for modelling complex nucleoprotein assemblies as rational tangles, and the associated enzymatic action as rational subtangle replacement. We harness the correspondence between specific curves on the boundary of a rational tangle and on the boundary of its branched double cover to classify rational tangles of distance d = 2 from a given rational tangle, in turn limiting the underlying DNA geometry.

UR - http://www.scopus.com/inward/record.url?scp=84855329605&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=84855329605&partnerID=8YFLogxK

U2 - 10.1143/PTPS.191.55

DO - 10.1143/PTPS.191.55

M3 - Article

AN - SCOPUS:84855329605

SP - 55

EP - 65

JO - Progress of Theoretical Physics Supplement

JF - Progress of Theoretical Physics Supplement

SN - 0375-9687

IS - 191

ER -