Studies of TBX4 and chromosome 17q23.1q23.2

An uncommon cause of nonsyndromic clubfoot

W. Lu, C. A. Bacino, B. S. Richards, C. Alvarez, J. E. Vandermeer, M. Vella, N. Ahituv, N. Sikka, F. R. Dietz, Susan H Blanton, J. T. Hecht

Research output: Contribution to journalArticle

20 Citations (Scopus)

Abstract

Clubfoot is a common birth defect characterized by inward posturing and rigid downward displacement of one or both feet. The etiology of syndromic forms of clubfoot is varied and the causes of isolated clubfoot are not well understood. A microduplication of 2.2Mb on chromosome 17q23.1q23.2 which includes T-box 4 (TBX4), a hindlimb-specific gene, and 16 other genes was recently identified in 3 of 66 families reported as nonsyndromic clubfoot, but additional non-foot malformations place them in the syndromic clubfoot category. Our study assesses whether variation in or around TBX4 contributes to nonsyndromic clubfoot. To determine whether this microduplication was a common cause of nonsyndromic clubfoot, 605 probands (from 148 multiplex and 457 simplex families) with nonsyndromic clubfoot were evaluated by copy number and oligonucleotide array CGH testing modalities. Only one multiplex family (0.68%) that had 16 with clubfoot and 9 with other foot anomalies, had a 350kb microduplication, which included the complete duplication of TBX4 and NACA2 and partial duplication of BRIP1. The microduplication was transmitted in an autosomal dominant pattern and all with the microduplication had a range of phenotypes from short wide feet and toes to bilateral clubfoot. Minimal evidence was found for an association between TBX4 and clubfoot and no pathogenic sequence variants were identified in the two known TBX4 hindlimb enhancer elements. Altogether, these results demonstrate that variation in and around the TBX4 gene and the 17q23.1q23.2 microduplication are not a frequent cause of this common orthopedic birth defect and narrows the 17q23.1q23.2 nonsyndromic clubfoot-associated region.

Original languageEnglish
Pages (from-to)1620-1627
Number of pages8
JournalAmerican Journal of Medical Genetics, Part A
Volume158 A
Issue number7
DOIs
StatePublished - Jul 1 2012

Fingerprint

Clubfoot
Chromosomes, Human, Pair 4
Foot
Hindlimb
Genes
Toes
Oligonucleotide Array Sequence Analysis
Orthopedics

Keywords

  • Association
  • Clubfoot
  • Genetics
  • Malformation
  • Microduplication
  • TBX4

ASJC Scopus subject areas

  • Genetics(clinical)
  • Genetics

Cite this

Lu, W., Bacino, C. A., Richards, B. S., Alvarez, C., Vandermeer, J. E., Vella, M., ... Hecht, J. T. (2012). Studies of TBX4 and chromosome 17q23.1q23.2: An uncommon cause of nonsyndromic clubfoot. American Journal of Medical Genetics, Part A, 158 A(7), 1620-1627. https://doi.org/10.1002/ajmg.a.35418

Studies of TBX4 and chromosome 17q23.1q23.2 : An uncommon cause of nonsyndromic clubfoot. / Lu, W.; Bacino, C. A.; Richards, B. S.; Alvarez, C.; Vandermeer, J. E.; Vella, M.; Ahituv, N.; Sikka, N.; Dietz, F. R.; Blanton, Susan H; Hecht, J. T.

In: American Journal of Medical Genetics, Part A, Vol. 158 A, No. 7, 01.07.2012, p. 1620-1627.

Research output: Contribution to journalArticle

Lu, W, Bacino, CA, Richards, BS, Alvarez, C, Vandermeer, JE, Vella, M, Ahituv, N, Sikka, N, Dietz, FR, Blanton, SH & Hecht, JT 2012, 'Studies of TBX4 and chromosome 17q23.1q23.2: An uncommon cause of nonsyndromic clubfoot', American Journal of Medical Genetics, Part A, vol. 158 A, no. 7, pp. 1620-1627. https://doi.org/10.1002/ajmg.a.35418
Lu, W. ; Bacino, C. A. ; Richards, B. S. ; Alvarez, C. ; Vandermeer, J. E. ; Vella, M. ; Ahituv, N. ; Sikka, N. ; Dietz, F. R. ; Blanton, Susan H ; Hecht, J. T. / Studies of TBX4 and chromosome 17q23.1q23.2 : An uncommon cause of nonsyndromic clubfoot. In: American Journal of Medical Genetics, Part A. 2012 ; Vol. 158 A, No. 7. pp. 1620-1627.
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abstract = "Clubfoot is a common birth defect characterized by inward posturing and rigid downward displacement of one or both feet. The etiology of syndromic forms of clubfoot is varied and the causes of isolated clubfoot are not well understood. A microduplication of 2.2Mb on chromosome 17q23.1q23.2 which includes T-box 4 (TBX4), a hindlimb-specific gene, and 16 other genes was recently identified in 3 of 66 families reported as nonsyndromic clubfoot, but additional non-foot malformations place them in the syndromic clubfoot category. Our study assesses whether variation in or around TBX4 contributes to nonsyndromic clubfoot. To determine whether this microduplication was a common cause of nonsyndromic clubfoot, 605 probands (from 148 multiplex and 457 simplex families) with nonsyndromic clubfoot were evaluated by copy number and oligonucleotide array CGH testing modalities. Only one multiplex family (0.68{\%}) that had 16 with clubfoot and 9 with other foot anomalies, had a 350kb microduplication, which included the complete duplication of TBX4 and NACA2 and partial duplication of BRIP1. The microduplication was transmitted in an autosomal dominant pattern and all with the microduplication had a range of phenotypes from short wide feet and toes to bilateral clubfoot. Minimal evidence was found for an association between TBX4 and clubfoot and no pathogenic sequence variants were identified in the two known TBX4 hindlimb enhancer elements. Altogether, these results demonstrate that variation in and around the TBX4 gene and the 17q23.1q23.2 microduplication are not a frequent cause of this common orthopedic birth defect and narrows the 17q23.1q23.2 nonsyndromic clubfoot-associated region.",
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