Molecular sequence analyses of the intergenic spacer (IGS) associated with rDNA of the two varieties of the pathogenic yeast, Cryptococcus neoformans

Mara Diaz, T. Boekhout, B. Theelen, J. W. Fell

Research output: Contribution to journalArticle

85 Citations (Scopus)

Abstract

The pathogen Crytococcus neoformans has been traditionally grouped in two varieties, C. neoformans var. neoformans (serotypes A, D and AD) and C. neoformans var. gattii (serotypes B and C). A recent taxonomic evaluation of C. neoformans var. neoformans described C. neoformans var. grubii as a new variety represented by serotype A isolates. Despite immunological, biochemical, ecological and molecular differences the three varieties are classified within one species. We examined the genetic variability of one hundred and five clinical and environmental isolates that included all varieties and serotypes. Sequence analysis of the intergenic spacer (IGS) associated with rDNA revealed significant differences in nucleotide composition between and within the varieties. Parsimony analysis showed five different genotypes representing distinct genetic lineages. Although there was a high degree of relatedness between serotype and genotype this relatedness was not exclusive as serotypes were not restricted to one particular genotypic group. Serotyping and sequence analyses indicate that C. neoformans var. grubii (serotype A) should not be recognized as a separate variety. Based on this study we propose to accept two separate species, C. neoformans (serotypes A, D and AD) and C. bacillisporus (serotypes B and C synonymous with C. neoformans var. gattii).

Original languageEnglish (US)
Pages (from-to)535-545
Number of pages11
JournalSystematic and Applied Microbiology
Volume23
Issue number4
StatePublished - 2000

Fingerprint

Cryptococcus neoformans
Ribosomal DNA
intergenic DNA
relatedness
yeast
Sequence Analysis
serotypes
genotype
Yeasts
yeasts
parsimony analysis
pathogen
Genotype
Serogroup
Serotyping
new variety
Nucleotides
sequence analysis
nucleotides
evaluation

Keywords

  • C. neoformans var. gattii
  • C. neoformans var. grubii
  • C. neoformans var. neoformans
  • Genotypes
  • Intergeneic spacer (IGS)
  • Nucleotide sequence analysis

ASJC Scopus subject areas

  • Applied Microbiology and Biotechnology

Cite this

Molecular sequence analyses of the intergenic spacer (IGS) associated with rDNA of the two varieties of the pathogenic yeast, Cryptococcus neoformans. / Diaz, Mara; Boekhout, T.; Theelen, B.; Fell, J. W.

In: Systematic and Applied Microbiology, Vol. 23, No. 4, 2000, p. 535-545.

Research output: Contribution to journalArticle

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