Lossless compression of DNA microarray images with inversion coder

Basar Koc, Ziya Arnavut, Huseyin Kocak

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Abstract

DNA microarray images are used to identify and monitor gene activity, or expression. In this study, we investigate the performance of the inversion coding technique in lossless compression of DNA microarray images. We show that inversion coding outperforms commonly used entropy coders and generic image compressors.

Original languageEnglish (US)
Title of host publicationProceedings - DCC 2014
Subtitle of host publication2014 Data Compression Conference
PublisherInstitute of Electrical and Electronics Engineers Inc.
Number of pages1
ISBN (Print)9781479938827
DOIs
StatePublished - Jan 1 2014
Event2014 Data Compression Conference, DCC 2014 - Snowbird, UT, United States
Duration: Mar 26 2014Mar 28 2014

Publication series

NameData Compression Conference Proceedings
ISSN (Print)1068-0314

Other

Other2014 Data Compression Conference, DCC 2014
CountryUnited States
CitySnowbird, UT
Period3/26/143/28/14

Keywords

  • BWIC
  • Image compression
  • Inversion coder
  • Microarray Images

ASJC Scopus subject areas

  • Computer Networks and Communications

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    Koc, B., Arnavut, Z., & Kocak, H. (2014). Lossless compression of DNA microarray images with inversion coder. In Proceedings - DCC 2014: 2014 Data Compression Conference [6824463] (Data Compression Conference Proceedings). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/DCC.2014.59