K-leap method for stochastic simulation of gene expression

Xiaodong Cai; Zhouyi Xu

doi:10.1109/GENSIPS.2006.353166

K-leap method for stochastic simulation of gene expression

Xiaodong Cai, Zhouyi Xu

Electrical and Computer Engineering

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract

In this paper, we develop a K-leap method for accelerating stochastic simulation. Compared to the τ-leap method of Gillespie and the τ-leap method with efficient step size selection of Cao et al., our simulation method is faster and more accurate.

Original language	English (US)
Title of host publication	2006 IEEE International Workshop on Genomic Signal Processing and Statstics, GENSIPS 2006
Pages	81-82
Number of pages	2
DOIs	https://doi.org/10.1109/GENSIPS.2006.353166
State	Published - Dec 1 2006
Event	2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006 - College Station, TX, United States Duration: May 28 2006 → May 30 2006

Publication series

Name	2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006

Other

Other	2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006
Country	United States
City	College Station, TX
Period	5/28/06 → 5/30/06

ASJC Scopus subject areas

Biochemistry, Genetics and Molecular Biology (miscellaneous)
Computational Theory and Mathematics
Computer Vision and Pattern Recognition
Statistics and Probability

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K-leap method for stochastic simulation of gene expression. / Cai, Xiaodong; Xu, Zhouyi.

2006 IEEE International Workshop on Genomic Signal Processing and Statstics, GENSIPS 2006. 2006. p. 81-82 4161787 (2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Cai, X & Xu, Z 2006, K-leap method for stochastic simulation of gene expression. in 2006 IEEE International Workshop on Genomic Signal Processing and Statstics, GENSIPS 2006., 4161787, 2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006, pp. 81-82, 2006 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2006, College Station, TX, United States, 5/28/06. https://doi.org/10.1109/GENSIPS.2006.353166

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author = "Xiaodong Cai and Zhouyi Xu",

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K-leap method for stochastic simulation of gene expression

Abstract

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Other

ASJC Scopus subject areas

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