Intermediates in the assembly of bacteriorhodopsin investigated by time-resolved absorption spectroscopy

Paula J. Booth, Amjad Farooq

Research output: Contribution to journalArticle

40 Citations (Scopus)

Abstract

The in vitro folding and assembly kinetics of bacteriorhodopsin have been studied by absorption spectroscopy Folding is initiated by rapid stopped-flow mixing of denatured apoprotein (bacterio-opsin) in SDS micelles and mixed dimyristoylglycerophosphocholine/Chaps micelles containing retinal. The apparent mixing rate of the two types of micelles has been determined by time-resolving the changes in light scattering by the micelles. Micelle mixing appears to occur in two stages: a fast phase with an apparent rate constant of about 420 s-1, and a second phase with an apparent rate constant of about 10 s-1. A rate constant of similar magnitude to the latter has previously been assigned to a protein-folding event on the basis of protein fluorescence studies [Booth, P.J., Farooq, A. and Flitsch, S.L. (1996) Biochemistry 35, 5902-5909]. However the results presented here show that this rate constant may be associated with a rearrangement of the mixed detergent/lipid micelles. When the changes in the retinal absorption band are lime-resolved during assembly of bacteriorhodopsin, a retinal-protein intermediate, with an absorption maximum of about 430 nm, has been identified. This absorption maximum lies between that of unbound retinal (at about 380 nm) and the native chromophore (at about 560 nm). A comparison of fluorescence and absorption data, together with previous evidence [Booth, P.J., Flitsch, S.L., Stern, L.J., Greenhalgh, D.A., Kim, P.S., and Khorana, H.G. (1995) Nat. Struct. Biol. 2, 139-143], suggests that the covalent Schiff-base link to retinal is not formed in the 430-nm-absorbing intermediate.

Original languageEnglish
Pages (from-to)674-680
Number of pages7
JournalEuropean Journal of Biochemistry
Volume246
Issue number3
StatePublished - Jun 27 1997
Externally publishedYes

Fingerprint

Bacteriorhodopsins
Micelles
Absorption spectroscopy
Spectrum Analysis
Rate constants
Fluorescence
Protein folding
Biochemistry
Apoproteins
Schiff Bases
Protein Folding
Chromophores
Detergents
Light scattering
Absorption spectra
Proteins
Lipids
Light
Kinetics

Keywords

  • Assembly
  • Bacteriorhodopsin
  • Folding
  • Membrane protein
  • Retinal binding

ASJC Scopus subject areas

  • Biochemistry

Cite this

Intermediates in the assembly of bacteriorhodopsin investigated by time-resolved absorption spectroscopy. / Booth, Paula J.; Farooq, Amjad.

In: European Journal of Biochemistry, Vol. 246, No. 3, 27.06.1997, p. 674-680.

Research output: Contribution to journalArticle

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