TY - JOUR
T1 - Differences in somatic TP53 mutation type in breast tumors by race and receptor status
AU - Pollock, Nijole C.
AU - Ramroop, Johnny R.
AU - Hampel, Heather
AU - Troester, Melissa A.
AU - Conway, Kathleen
AU - Hu, Jennifer J.
AU - Freudenheim, Jo L.
AU - Olopade, Olufunmilayo I.
AU - Huo, Dezheng
AU - Ziv, Elad
AU - Neuhausen, Susan L.
AU - Stevens, Patrick
AU - McElroy, Joseph Paul
AU - Toland, Amanda Ewart
N1 - Funding Information:
The OSU CCC TCC is supported in part by National Cancer Institute grant P30 CA016058. This work was supported by R01 CA215151. JR was supported by a Pelotonia Fellowship. KCD was supported by The UNC Breast Cancer SPORE Grant CA58223 from the National Cancer Institute. OIO and DH were supported by grants from National Institutes of Health (P20 CA233307, R01 MD013452) and Breast Cancer Research Foundation. For the City of Hope Hispanic breast cancer cases: sample collection and data were collected under support from NIH R01 CA184585 (SLN and EZ); tumor sequencing was supported by the National Institute on Minority Health and Health Disparities; and tumor blocks were pulled and slides cut in the Pathology Lab Core supported by the National Cancer Institute of the National Institutes of Health under Award Number P30CA033572. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.
Funding Information:
We thank Lara Sucheston-Campbell, Philip Tsichlis, and Michael Freitas for the initial ideas leading to this study. The Ohio State University Comprehensive Cancer Center (OSU CCC) Total Cancer Care from the Biospecimen Services Shared Resource provided mutational data on breast cancer cases. The results published here are in whole or part based upon data generated by The Cancer Genome Atlas (TCGA) Research Network: https://www.cancer.gov/tcga.
Publisher Copyright:
© 2022, The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.
PY - 2022/4
Y1 - 2022/4
N2 - Purpose: Somatic driver mutations in TP53 are associated with triple-negative breast cancer (TNBC) and poorer outcomes. Breast cancers in women of African ancestry (AA) are more likely to be TNBC and have somatic TP53 mutations than cancers in non-Hispanic White (NHW) women. Missense driver mutations in TP53 have varied functional impact including loss-of-function (LOF) or gain-of-function (GOF) activity, and dominant negative (DNE) effects. We aimed to determine if there were differences in somatic TP53 mutation types by patient ancestry or TNBC status. Methods: We identified breast cancer datasets with somatic TP53 mutation data, ancestry, age, and hormone receptor status. Mutations were classified for functional impact using published data and type of mutation. We assessed differences using Fisher’s exact test. Results: From 96 breast cancer studies, we identified 2964 women with somatic TP53 mutations: 715 (24.1%) Asian, 258 (8.7%) AA, 1931 (65.2%) NHW, and 60 (2%) Latina. The distribution of TP53 mutation type was similar by ancestry. However, 35.8% of tumors from NHW individuals had GOF mutations compared to 29% from AA individuals (p = 0.04). Mutations with DNE activity were positively associated with TNBC (OR 1.37, p = 0.03) and estrogen receptor (ER) negative status (OR 1.38; p = 0.005). Conclusions: Somatic TP53 mutation types did not differ by ancestry overall, but GOF mutations were more common in NHW women than AA women. ER-negative and TNBC tumors are less likely to have DNE+ TP53 mutations which could reflect biological processes. Larger cohorts and functional studies are needed to further elucidate these findings.
AB - Purpose: Somatic driver mutations in TP53 are associated with triple-negative breast cancer (TNBC) and poorer outcomes. Breast cancers in women of African ancestry (AA) are more likely to be TNBC and have somatic TP53 mutations than cancers in non-Hispanic White (NHW) women. Missense driver mutations in TP53 have varied functional impact including loss-of-function (LOF) or gain-of-function (GOF) activity, and dominant negative (DNE) effects. We aimed to determine if there were differences in somatic TP53 mutation types by patient ancestry or TNBC status. Methods: We identified breast cancer datasets with somatic TP53 mutation data, ancestry, age, and hormone receptor status. Mutations were classified for functional impact using published data and type of mutation. We assessed differences using Fisher’s exact test. Results: From 96 breast cancer studies, we identified 2964 women with somatic TP53 mutations: 715 (24.1%) Asian, 258 (8.7%) AA, 1931 (65.2%) NHW, and 60 (2%) Latina. The distribution of TP53 mutation type was similar by ancestry. However, 35.8% of tumors from NHW individuals had GOF mutations compared to 29% from AA individuals (p = 0.04). Mutations with DNE activity were positively associated with TNBC (OR 1.37, p = 0.03) and estrogen receptor (ER) negative status (OR 1.38; p = 0.005). Conclusions: Somatic TP53 mutation types did not differ by ancestry overall, but GOF mutations were more common in NHW women than AA women. ER-negative and TNBC tumors are less likely to have DNE+ TP53 mutations which could reflect biological processes. Larger cohorts and functional studies are needed to further elucidate these findings.
KW - Breast cancer
KW - Dominant negative
KW - Gain-of-function
KW - Loss-of-function
KW - Racial differences
KW - TP53
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U2 - 10.1007/s10549-022-06509-3
DO - 10.1007/s10549-022-06509-3
M3 - Article
C2 - 35286522
AN - SCOPUS:85126202960
VL - 192
SP - 639
EP - 648
JO - Breast Cancer Research and Treatment
JF - Breast Cancer Research and Treatment
SN - 0167-6806
IS - 3
ER -