Bayesian κ-Space time reconstruction of MR spectroscopic imaging for enhanced resolution

John Kornak, Karl Young, Brian J. Soher, Andrew A Maudsley

Research output: Contribution to journalArticle

15 Citations (Scopus)

Abstract

A $k$-space-time Bayesian statistical reconstruction method (K-Bayes) is proposed for the reconstruction of metabolite images of the brain from proton (1H) magnetic resonance (MR) spectroscopic imaging (MRSI) data. K-Bayes performs full spectral fitting of the data while incorporating structural (anatomical) spatial information through the prior distribution. K-Bayes provides increased spatial resolution over conventional discrete Fourier transform (DFT) based methods by incorporating structural information from higher resolution coregistered and segmented structural MR images. The structural information is incorporated via a Markov random field (MRF) model that allows for differential levels of expected smoothness in metabolite levels within homogeneous tissue regions and across tissue boundaries. By further combining the structural prior model with a κ-spacetime MRSI signal and noise model (for a specific set of metabolites and based on knowledge from prior spectral simulations of metabolite signals), the impact of artifacts generated by low-resolution sampling is also reduced. The posterior-mode estimates are used to define the metabolite map reconstructions, obtained via a generalized expectation-maximization algorithm. K-Bayes was tested using simulated and real MRSI datasets consisting of sets of κ-spacetime-series (the recorded free induction decays). The results demonstrated that K-Bayes provided qualitative and quantitative improvement over DFT methods.

Original languageEnglish
Article number5432976
Pages (from-to)1333-1350
Number of pages18
JournalIEEE Transactions on Medical Imaging
Volume29
Issue number7
DOIs
StatePublished - Jul 1 2010

Fingerprint

Magnetic resonance
Metabolites
Magnetic Resonance Imaging
Fourier Analysis
Imaging techniques
Computer-Assisted Image Processing
Discrete Fourier transforms
Structural Models
Artifacts
Protons
Tissue
Magnetic Resonance Spectroscopy
Brain
Sampling

Keywords

  • Bayesian image analysis
  • expectation maximization (EM)
  • K-Bayes
  • magnetic resonance (MR)
  • magnetic resonance spectroscopy imaging (MRSI)
  • metabolite maps
  • MRSI reconstruction

ASJC Scopus subject areas

  • Electrical and Electronic Engineering
  • Computer Science Applications
  • Radiological and Ultrasound Technology
  • Software

Cite this

Bayesian κ-Space time reconstruction of MR spectroscopic imaging for enhanced resolution. / Kornak, John; Young, Karl; Soher, Brian J.; Maudsley, Andrew A.

In: IEEE Transactions on Medical Imaging, Vol. 29, No. 7, 5432976, 01.07.2010, p. 1333-1350.

Research output: Contribution to journalArticle

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