A metastasis modifier locus on human chromosome 8p in uveal melanoma identified by integrative genomic analysis

Michael D. Onken, Lori A. Worley, J. William Harbour

Research output: Contribution to journalArticle

68 Citations (Scopus)

Abstract

Purpose: To identify genes that modify metastatic risk in uveal melanoma, a type of cancer that is valuable for studying metastasis because of its remarkably consistent metastatic pattern and well-characterized gene expression signature associated with metastasis. Experimental Design: We analyzed 53 primary uveal melanomas by gene expression profiling, array-based comparative genomic hybridization, array-based global DNA methylation profiling, and single nucleotide polymorphism - based detection of loss of heterozygosity to identify modifiers of metastatic risk. A candidate gene, leucine zipper tumor suppressor-1 (LZTS1), was examined for its effect on proliferation, migration, and motility in cultured uveal melanoma cells. Results: In metastasizing primary uveal melanomas, deletion of chromosome 8p12-22 and DNA hypermethylation of the corresponding region of the retained hemizygous 8p allele were associated with more rapid metastasis. Among the 11 genes located within the deleted region, LZTS1 was most strongly linked to rapid metastasis. LZTS1 was silenced in rapidly metastasizing and metastatic uveal melanomas but not in slowly metastasizing and nonmetastasizing uveal melanomas. Forced expression of LZTS1 in metastasizing uveal melanoma cells inhibited their motility and invasion, whereas depletion of LZTS1 increased their motility. Conclusions: We have described a metastatic modifier locus on chromosome 8p and identified LZTS1 as a potential metastasis suppressor within this region. This study shows the utility of integrative genomic methods for identifying modifiers of metastatic risk in human cancers and may suggest new therapeutic targets in metastasizing tumor cells.

Original languageEnglish
Pages (from-to)3737-3745
Number of pages9
JournalClinical Cancer Research
Volume14
Issue number12
DOIs
StatePublished - Jun 15 2008
Externally publishedYes

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Human Chromosomes
Leucine Zippers
Neoplasm Metastasis
Neoplasms
Genes
Uveal melanoma
Chromosomes, Human, Pair 22
Comparative Genomic Hybridization
DNA Fingerprinting
Loss of Heterozygosity
Gene Expression Profiling
DNA Methylation
Transcriptome
Single Nucleotide Polymorphism
Research Design
Chromosomes
Alleles
DNA

ASJC Scopus subject areas

  • Cancer Research
  • Oncology

Cite this

A metastasis modifier locus on human chromosome 8p in uveal melanoma identified by integrative genomic analysis. / Onken, Michael D.; Worley, Lori A.; William Harbour, J.

In: Clinical Cancer Research, Vol. 14, No. 12, 15.06.2008, p. 3737-3745.

Research output: Contribution to journalArticle

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