A force-based protein biochip

K. Blank, T. Mai, I. Gilbert, S. Schiffmann, J. Rankl, R. Zivin, C. Tackney, T. Nicolaus, K. Spinnler, F. Oesterhelt, M. Benoit, H. Clausen-Schaumann, H. E. Gaub

Research output: Contribution to journalArticle

58 Scopus citations

Abstract

A parallel assay for the quantification of single-molecule binding forces was developed based on differential unbinding force measurements where ligand-receptor interactions are compared with the unzipping forces of DNA hybrids. Using the DNA zippers as molecular force sensors, the efficient discrimination between specific and nonspecific interactions was demonstrated for small molecules binding to specific receptors, as well as for protein-protein interactions on protein arrays. Finally, an antibody sandwich assay with different capture antibodies on one chip surface and with the detection antibodies linked to a congruent surface via the DNA zippers was used to capture and quantify a recombinant hepatitis C antigen from solution. In this case, the DNA zippers enable not only discrimination between specific and nonspecific binding, but also allow for the local application of detection antibodies, thereby eliminating false-positive results caused by cross-reactive antibodies and nonspecific binding.

Original languageEnglish (US)
Pages (from-to)11356-11360
Number of pages5
JournalProceedings of the National Academy of Sciences of the United States of America
Volume100
Issue number20
DOIs
StatePublished - Sep 30 2003

ASJC Scopus subject areas

  • General

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    Blank, K., Mai, T., Gilbert, I., Schiffmann, S., Rankl, J., Zivin, R., Tackney, C., Nicolaus, T., Spinnler, K., Oesterhelt, F., Benoit, M., Clausen-Schaumann, H., & Gaub, H. E. (2003). A force-based protein biochip. Proceedings of the National Academy of Sciences of the United States of America, 100(20), 11356-11360. https://doi.org/10.1073/pnas.1934928100