School of Medicine

Research Output

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Conference article
2018

OCT-OCTA segmentation: A novel framework and an application to segment Bruch’s Membrane in the presence of Drusen

Schottenhamml, J., Moult, E. M., Novais, E. A., Kraus, M. F., Lee, B. K., Choi, W. J., Ploner, S. B., Husvogt, L., Lu, C. D., Yiu, P., Rosenfeld, P. J., Duker, J. S., Maier, A. K., Waheed, N. & Fujimoto, J. G., Jan 1 2018, In : Informatik aktuell. 211279, 1 p.

Research output: Contribution to journalConference article

1 Scopus citations
2014

CROI 2014: Basic science review

Stevenson, M., Jan 1 2014, In : Topics in Antiviral Medicine. 22, 2, p. 574-578 5 p.

Research output: Contribution to journalConference article

4 Scopus citations
2013

Top-down fabricated polysilicon nanoribbon biosensor chips for cancer diagnosis

Chang, H. K., Wang, X., Aroonyadet, N., Zhang, R., Song, Y., Datar, R., Cote, R., Thompson, M. & Zhou, C., Jan 1 2013, In : Materials Research Society Symposium Proceedings. 1569

Research output: Contribution to journalConference article

2012

Influence of injury risk thresholds on the performance of an algorithm to predict crashes with serious injuries

Bahouth, G., Digges, K. & Schulman, C., Dec 1 2012, In : Annals of Advances in Automotive Medicine. 56, p. 223-230 8 p.

Research output: Contribution to journalConference article

21 Scopus citations
2011

Bioassay ontology to describe high-throughput screening assays and their results

Vempati, U., Visser, U., Abeyruwan, S., Sakurai, K., Przydzial, M., Chung, C., Smith, R., Koleti, A., Mader, C., Lemmon, V. & Schürer, S., Dec 1 2011, In : CEUR Workshop Proceedings. 833, p. 209-216 8 p.

Research output: Contribution to journalConference article

Cell line ontology: Redesigning the cell line knowledgebase to aid integrative translational informatics

Sarntivijai, S., Xiang, Z., Meehan, T. F., Diehl, A. D., Vempati, U., Schurer, S., Pang, C., Malone, J., Parkinson, H., Athey, B. D. & He, Y., Dec 1 2011, In : CEUR Workshop Proceedings. 833, p. 25-32 8 p.

Research output: Contribution to journalConference article

11 Scopus citations
2010

Prontolearn: Unsupervised lexico-semantic ontology generation using probabilistic methods

Abeyruwan, S., Visser, U., Lemmon, V. & Schürer, S., Dec 1 2010, In : CEUR Workshop Proceedings. 654, p. 25-36 12 p.

Research output: Contribution to journalConference article

2 Scopus citations
2009

Automated Analysis of OCT Images of the Crystalline Lens

Kim, E., Ehrmann, K., Uhlhorn, S., Borja, D. & Parel, J. M., May 13 2009, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 7163, 716313.

Research output: Contribution to journalConference article

7 Scopus citations
2008

SIBS for ophthalmic and cardiovascular applications

Pinchuk, L., Kato, Y. P., Zhou, Y., Orozco, M., Schoephoerster, R. T., Parel, J. M. & Kennedy, J. P., Sep 22 2008, In : American Chemical Society, Polymer Preprints, Division of Polymer Chemistry. 49, 1, p. 879-880 2 p.

Research output: Contribution to journalConference article

2007

The Scenescore for improved pre-hospital triage of motor-vehicle crash victims

Schulman, C. I., Wilbur, V., Leibowitz, B., Labiste, L., Perdeck, E., Bahouth, G., Digges, K. & Augenstein, J. S., Dec 1 2007, In : Annual Proceedings - Association for the Advancement of Automotive Medicine. p. 49-60 12 p.

Research output: Contribution to journalConference article

3 Scopus citations
2005

Automated segmentation of spinal diffusion tensor MR imaging

Younis, A. A., Pattany, P. M., Ramirez, N., Burns, R. J. & Sharawy, M. I., Nov 9 2005, In : Conference Proceedings - IEEE SOUTHEASTCON. p. 187-192 6 p.

Research output: Contribution to journalConference article

5 Scopus citations

Crystalline lens MTF measurement during simulated accommodation

Borja, D., Takeuchi, G., Ziebarth, N., Acosta, A. C., Manns, F. & Parel, J. M., Jul 21 2005, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5688, p. 26-32 7 p., 06.

Research output: Contribution to journalConference article

Endocapsular hyperthermia probe to prevent posterior capsular opacification

Orozco, M., Nose, I., Lee, W., Acosta, A. C., Fragoso, M., Feraandez, V., Salas, N. & Parel, J. M., Jul 21 2005, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5688, p. 252-259 8 p., 44.

Research output: Contribution to journalConference article

5 Scopus citations
4 Scopus citations

Evaluation of sub-voxel registration accuracy between MRI and 3D MR spectroscopy of the brain

Rousseau, F., Maudsley, A., Ebel, A., Darkazanli, A., Weber, P., Sivasankaran, K., Yu, Y. & Studholme, C., Aug 25 2005, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5747, II, p. 1213-1221 9 p., 137.

Research output: Contribution to journalConference article

6 Scopus citations

Nanosensing applications of in2O3 nanowires and carbon nanotubes

Zhou, C., Li, C., Curreli, M., Lin, H., Ishikawa, F. N., Datar, R., Cote, R. J. & Thompson, M. E., Dec 1 2005, In : Proceedings of SPIE - The International Society for Optical Engineering. 6008, 60080F.

Research output: Contribution to journalConference article

Non-contact optical measurement of lens capsule thickness during simulated accommodation

Ziebarth, N., Manns, F., Acosta, A. C. & Parel, J. M., Jul 21 2005, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5688, p. 19-25 7 p., 05.

Research output: Contribution to journalConference article

Photochemical surface modification method for fibrin free intraocular lens

Sato, Y., Sato, N., Shimizu, K., Sasou, M., Parel, J. M. & Murahara, M., Jul 21 2005, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5688, p. 260-267 8 p., 45.

Research output: Contribution to journalConference article

2 Scopus citations
2004
4 Scopus citations

Computational modeling of corneal refractive surgery

Fernández, D. C., Niazy, A. M., Kurtz, R. M., Djotyan, G. P. & Juhasz, T., Dec 1 2004, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5, 3, p. 59-70 12 p., 5314-57.

Research output: Contribution to journalConference article

5 Scopus citations

Development of fibrin-free intraocular lens with photochemical surface modification

Sato, Y., Tanizawa, K., Anai, H., Sato, N., Sato, Y., Ajiki, T., Parel, J. M. & Murahara, M., Dec 1 2004, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5, 3, p. 104-111 8 p., 5314-20.

Research output: Contribution to journalConference article

Effect of the internal optics on the outcome of custom-LASIK in an eye model

Manns, F., Ho, A. & Parel, J. M., Dec 1 2004, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5, 3, p. 201-205 5 p., 5314-38.

Research output: Contribution to journalConference article

Electroretinographic and clinicopathologic correlations of retinal dysfunction in infantile neuronal ceroid lipofuscinosis (infantile Batten disease)

Weleber, R. G., Gupta, N., Trzupek, K. M., Wepner, M. S., Kurz, D. E. & Milam, A. H., Sep 1 2004, In : Molecular Genetics and Metabolism. 83, 1-2, p. 128-137 10 p.

Research output: Contribution to journalConference article

32 Scopus citations

Ex vivo accommodation simulator II - Concept and preliminary results

Ehrmann, K., Ho, A. & Parel, J. M., Dec 1 2004, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5, 3, p. 48-58 11 p., 5314-14.

Research output: Contribution to journalConference article

3 Scopus citations

Functional micro-imaging of soft and hard tissue using synchrotron light

Thurner, P. J., Wyss, P., Voide, R., Stauber, M., Müller, B., Stampanoni, M., Hubbell, J. A., Müller, R. & Sennhauser, U., Dec 1 2004, In : Proceedings of SPIE - The International Society for Optical Engineering. 5535, p. 112-128 17 p., 14.

Research output: Contribution to journalConference article

9 Scopus citations

High-throughput cell manipulation using ultrasound fields

Kim, D. H., Haake, A., Sun, Y., Neild, A. P., Ihm, J. E., Dual, J., Hubbell, J. A., Ju, B. K. & Nelson, B. J., Dec 1 2004, In : Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 26 IV, p. 2571-2574 4 p.

Research output: Contribution to journalConference article

14 Scopus citations
1 Scopus citations
1 Scopus citations

Kinetics of corneal thermal shrinkage

Borja, D., Manns, F., Lee, W. & Parel, J. M., Dec 1 2004, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5, 3, p. 79-87 9 p., 5314-15.

Research output: Contribution to journalConference article

3 Scopus citations

Modelling the performance of accommodating intraocular lenses

Ho, A., Manns, F., Pham, T., Evans, S. & Parel, J. M., Dec 1 2004, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5, 3, p. 36-47 12 p., 5314-12.

Research output: Contribution to journalConference article

1 Scopus citations

Non-contact, optical measurement of lens capsule thickness EX VIVO

Ziebarth, N., Manns, F., Uhlhorn, S. & Parel, J. M., Dec 1 2004, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5, 3, p. 1-9 9 p., 5314-03.

Research output: Contribution to journalConference article

Spectroscopic studies of mitochondrial NADH fluorescence signals in brain slices

Qiu, L., Zhao, W. & Sick, T., Dec 1 2004, In : Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 26 VII, p. 4986-4989 4 p.

Research output: Contribution to journalConference article

2 Scopus citations
2003

Angiographic quantification of angiogenesis

Gounis, M. J., Lieber, B. B., Webster, K. A., Wasserlauf, B. J., Prentice, H. M. & Wakhloo, A. K., Jan 1 2003, In : American Society of Mechanical Engineers, Bioengineering Division (Publication) BED. 55, p. 295-296 2 p.

Research output: Contribution to journalConference article

Assessing changes in physical lens dimensions during immersion in tissue preservation media using shadowphotogrammetry

Rosen, A., Denham, D., Manns, F., Fernandez, V., Stoiber, J., Augusteyn, R. & Parel, J. M., Dec 5 2003, In : Proceedings of SPIE - The International Society for Optical Engineering. 4951, p. 42-47 6 p.

Research output: Contribution to journalConference article

Corneal ablation rate at 266 nm

Söderberg, P., Manns, F., Sulhorn, S., Salas, N., Lamar, P. & Parel, J. M., Dec 5 2003, In : Proceedings of SPIE - The International Society for Optical Engineering. 4951, p. 77-82 6 p.

Research output: Contribution to journalConference article

Effects of immersion solutions on corneal tissue strip hydration and thermal shrinkage

Borja, D., Manns, F., Lamar, P., Rosen, A. & Parel, J. M., Dec 8 2003, In : Proceedings of SPIE - The International Society for Optical Engineering. 4951, p. 67-70 4 p.

Research output: Contribution to journalConference article

Fibrin free and aqueous humor penetration modified membrane with ArF excimer laser for glaucoma implant

Sato, Y., Parel, J. M. & Murahara, M., Jul 25 2003, In : Materials Research Society Symposium - Proceedings. 752, p. 83-88 6 p.

Research output: Contribution to journalConference article

5 Scopus citations

Laser induced photochemical surface modification of PMMA for fibrin free intraocular lens

Sato, Y., Tanizawa, K., Manns, F., Parel, J. M. & Murahara, M., Dec 5 2003, In : Proceedings of SPIE - The International Society for Optical Engineering. 4951, p. 92-103 12 p.

Research output: Contribution to journalConference article

9 Scopus citations

Microsurgical laser Doppler probe for simultaneous intraoperative monitoring of cochlear blood flow and electrocochleography from the round window

Abiy, L., Telischi, F., Parel, J. M., Manns, F., Saettele, R., Morawski, K., Ozdamar, O., Borgos, J., Delgado, R., Miskiel, E. & Yavuz, E., Sep 29 2003, In : Proceedings of SPIE - The International Society for Optical Engineering. 4949, p. 272-277 6 p.

Research output: Contribution to journalConference article

Miniaturized fundus camera

Gliss, C., Parel, J. M., Flynn, J. T., Pratisto, H. & Niederer, P., Dec 5 2003, In : Proceedings of SPIE - The International Society for Optical Engineering. 4951, p. 196-207 12 p.

Research output: Contribution to journalConference article

Predictions of Tissue Denaturation During Experimental Laser Interstitial Thermotherapy for Breast Tumors

Salas, N., Manns, F., Parel, J. M., Milne, P. J., Denham, D. B. & Robinson, D. S., Sep 29 2003, In : Proceedings of SPIE - The International Society for Optical Engineering. 4949, p. 444-449 6 p.

Research output: Contribution to journalConference article

1 Scopus citations

Qualitative optical-thermal model of argon, selective, and microsecond infrared laser trabeculoplasty

Manns, F., Parel, J. M., Fernandez, V., Stoiber, J., Lamar, P., Salas, N. & Fantes, F., Dec 5 2003, In : Proceedings of SPIE - The International Society for Optical Engineering. 4951, p. 71-76 6 p.

Research output: Contribution to journalConference article

2 Scopus citations

Ultrasound tomography of breast tissue

Duric, N., Littrup, P., Holsapple, E., Babkin, A., Duncan, R., Kalinin, A., Pevzner, R. & Tokarev, M., Sep 12 2003, In : Proceedings of SPIE - The International Society for Optical Engineering. 5035, p. 24-32 9 p.

Research output: Contribution to journalConference article

9 Scopus citations
2002

Bacterial resistance after short-term exposure to antibiotics

Wood, T. O., Dickson, H., Nix, V. A., Hamilton, D., Forster, R. K., Nirankari, V. S., Lindstrom, R. L. & Schwab, I. R., Dec 1 2002, In : Transactions of the American Ophthalmological Society. 100, p. 137-142 6 p.

Research output: Contribution to journalConference article

1 Scopus citations

Clinical decision making based on data from GDx: One-year observations

Bobrow, J. C., Ritch, R. & Anderson, D. R., Dec 1 2002, In : Transactions of the American Ophthalmological Society. 100, p. 131-136 6 p.

Research output: Contribution to journalConference article

1 Scopus citations

Delta-9-tetrahydrocannabinol (THC) in the treatment of end-stage open-angle glaucoma

Flach, A. J., Anderson, D. R., Spaeth, G. L. & Cantor, L. B., Dec 1 2002, In : Transactions of the American Ophthalmological Society. 100, p. 215-224 10 p.

Research output: Contribution to journalConference article

24 Scopus citations

Diagnostic transvitreal fine-needle aspiration biopsy of small melanocytic choroidal tumors in nevus versus melanoma category

Augsburger, J. J., Corrêa, Z. M., Schneider, S., Yassin, R. S., Robinson-Smith, T., Ehya, H., Trichopoulos, N., Grossniklaus, H. E., Feman, S. S., Gutman, F. A., Forster, R. K., Lakhanpal, V. & Crawford, J. B., Dec 1 2002, In : Transactions of the American Ophthalmological Society. 100, p. 225-234 10 p.

Research output: Contribution to journalConference article

56 Scopus citations

Flow cytometric monitoring of hormone receptor expression in human solid tumors

Krishan, A., Jan 1 2002, In : Proceedings of SPIE - The International Society for Optical Engineering. 4622, p. 211-217 7 p.

Research output: Contribution to journalConference article