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2019

OCT Segmentation via Deep Learning: A Review of Recent Work

Pekala, M., Joshi, N., Liu, T. Y. A., Bressler, N. M., Cabrera DeBuc, D. & Burlina, P., Jan 1 2019, Computer Vision – ACCV 2018 Workshops - 14th Asian Conference on Computer Vision, 2018, Revised Selected Papers. Carneiro, G. & You, S. (eds.). Springer Verlag, p. 316-322 7 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11367 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Recent Developments of Retinal Image Analysis in Alzheimer’s Disease and Potential AI Applications

Cabrera DeBuc, D. & Arthur, E., Jan 1 2019, Computer Vision – ACCV 2018 Workshops - 14th Asian Conference on Computer Vision, 2018, Revised Selected Papers. Carneiro, G. & You, S. (eds.). Springer Verlag, p. 261-275 15 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11367 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Segmentation of corneal optical coherence tomography images using Graph Search and Radon transform

Elsawy, A., Abdel-Mottaleb, M. & Abou Shousha, M., Jan 1 2019, Medical Imaging 2019: Image Processing. Landman, B. A., Angelini, E. D., Angelini, E. D. & Angelini, E. D. (eds.). SPIE, 109491O. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10949).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Segmentation of corneal optical coherence tomography images using randomized Hough transform

Elsawy, A., Abdel-Mottaleb, M. & Abou Shousha, M., Jan 1 2019, Medical Imaging 2019: Image Processing. Landman, B. A., Angelini, E. D., Angelini, E. D. & Angelini, E. D. (eds.). SPIE, 109490U. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10949).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Semi-supervised Transfer Learning for Convolutional Neural Networks for Glaucoma Detection

Al Ghamdi, M., Li, M., Abdel-Mottaleb, M. & Abou Shousha, M., May 1 2019, 2019 IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2019 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 3812-3816 5 p. 8682915. (ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings; vol. 2019-May).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations
2018

Why choroid vessels appear dark in clinical OCT images

Kirby, M. A., Li, C., Choi, W. J., Gregori, G., Rosenfeld, P. J. & Wang, R., Jan 1 2018, Ophthalmic Technologies XXVIII. SPIE, Vol. 10474. 1047428

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations
2017

Inter-session repeatability of retinal layer thickness in optical coherence tomography

Cabrera DeBuc, D., Tian, J., Bates, N. & Somfai, G. M., 2017, Medical Imaging 2017: Biomedical Applications in Molecular, Structural, and Functional Imaging. SPIE, Vol. 10137. 101371J

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations
2014

Biometry of the ciliary muscle during dynamic accommodation assessed with OCT

Ruggeri, M., Hernandez, V., De Freitas, C., Manns, F. & Parel, J. M., Jan 1 2014, Ophthalmic Technologies XXIV. SPIE, 89300W. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 8930).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Improved mechanical properties of poly(styreneblock-isobutylene-block-styrene) due to nanoclay Reinforcement

Fittipaldi, M., Grace, L. R. & Tse, D., 2014, Proceedings of the American Society for Composites - 29th Technical Conference, ASC 2014; 16th US-Japan Conference on Composite Materials; ASTM-D30 Meeting. DEStech Publications

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Islation of neural crest-derived pluripotent stem cells in adult dental tissue

Cheun, H. S., Pelaez, D. & Huang, C-Y., 2014, 4th International Conference on Stem Cell Engineering 2014. AIChE, p. 173-174 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2013

Novel pluripotent adult stem cell source for neurogenesis

Fortino, V. R., Pawley, D., Pelaez, D. & Cheung, H. S., Aug 5 2013, Proceedings - 29th Southern Biomedical Engineering Conference, SBEC 2013. p. 15-16 2 p. 6525653. (Proceedings - 29th Southern Biomedical Engineering Conference, SBEC 2013).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Pulsed infrared radiation leads to synchronous contraction in stem cell derived cardiomyocytes

Greenberg, J. M., Rajguru, S. M., Pelaez, D. & Cheung, H. S., Aug 5 2013, Proceedings - 29th Southern Biomedical Engineering Conference, SBEC 2013. p. 105-106 2 p. 6525698. (Proceedings - 29th Southern Biomedical Engineering Conference, SBEC 2013).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations
2012

Evaluation of water film thickness on contact lens by improved reflectometry technique

Lu, H., Wang, M. R. & Wang, J., Apr 2 2012, Ophthalmic Technologies XXII. 82091S. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 8209).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Evidence for altered spinal canal compliance and cerebral venous drainage in untreated idiopathic intracranial hypertension

Alperin, N., Lam, B. L., Tain, R. W., Ranganathan, S., Letzing, M., Bloom, M., Alexander, B., Aroucha, P. R. & Sklar, E., Jan 1 2012, Intracranial Pressure and Brain Monitoring XIV. Springer-Verlag Wien, p. 201-205 5 p. (Acta Neurochirurgica, Supplementum; vol. 114).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

12 Scopus citations

Extracting diagnostic information from optical coherence tomography images of diabetic retinal tissues using depthdependent attenuation rate and fractal analysis.

DeBuc, D. C., Gao, W., Tátrai, E., Laurik, L., Varga, B., Ölvedy, V., Smiddy, W. E., Tchitnga, R., Somogyib, A. & Somfái, G. M., Dec 1 2012, Biomedical Optics, BIOMED 2012. p. BTu3A.74 (Biomedical Optics, BIOMED 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Regeneration of cone outer segments induced by CNTF

Wen, R., Tao, W., Luo, L., Huang, D., Kauper, K., Stabila, P., LaVail, M. M., Laties, A. M. & Li, Y., Jan 23 2012, Retinal Degenerative Diseases. LaVail, M., Anderson, R., Grimm, C., Ash, J. & Hollyfield, J. (eds.). p. 93-99 7 p. (Advances in Experimental Medicine and Biology; vol. 723).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

10 Scopus citations

Unraveling the molecular mystery of retinal pigment epithelium phagocytosis

Caberoy, N. B. & Li, W., Jan 23 2012, Retinal Degenerative Diseases. LaVail, M., Anderson, R., Grimm, C., Ash, J. & Hollyfield, J. (eds.). p. 693-699 7 p. (Advances in Experimental Medicine and Biology; vol. 723).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Visible light optical coherence tomography for in vivo imaging the spectral contrasts of the retinal nerve fiber layer

Zhang, X., Hu, J., Knighton, R. W., Huang, X. R., Puliafito, C. A. & Jiao, S., Jan 1 2012, Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XVI. SPIE, 82130H. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 8213).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

What is the role of CCR3 in choroidal neovascularization?

Li, Y., Huang, D., Xia, X., Wang, Z., Luo, L. & Wen, R., Jan 23 2012, Retinal Degenerative Diseases. LaVail, M., Anderson, R., Grimm, C., Ash, J. & Hollyfield, J. (eds.). p. 279-284 6 p. (Advances in Experimental Medicine and Biology; vol. 723).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2011

Analysis of water film thickness on contact lens by reflectometry technique

Wang, M. R., Lu, H., Wang, J. & Shen, M., Apr 1 2011, Ophthalmic Technologies XXI. 788503. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7885).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Cataract surgery with OCT-guided femtosecond laser

Palanker, D., Schuele, G., Friedman, N. J., Andersen, D., Blumenkranz, M. S., Batlle, J., Feliz, R., Talamo, J., Marcellino, G., Seibel, B. & Culbertson, W., Dec 1 2011, Bio-Optics: Design and Application, BODA 2011. (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ridge-based retinal image registration algorithm involving OCT fundus images

Li, Y., Gregori, G., Knighton, R. W., Lujan, B. J., Rosenfeld, P. J. & Lam, B. L., Jun 9 2011, Medical Imaging 2011: Image Processing. 79621Y. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7962).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Technology needs for corneal transplant surgery

Vaddavalli, P. K. & Yoo, S. H., Apr 1 2011, Ophthalmic Technologies XXI. 788502. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7885).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations
2010

Small animal ocular biometry using optical coherence tomography

Ruggeri, M., Kocaoglu, O., Uhlhorn, S., Borja, D., Urs, R., Chou, T. H., Porciatti, V., Parel, J. M. & Manns, F., Dec 1 2010, Ophthalmic Technologies XX. 755016. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7550).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations
2009

Model of the isolated Ex-Vivo human crystalline lens using cosine functions

Urs, R., Ho, A., Manns, F. & Parel, J. M., Nov 6 2009, 25th Southern Biomedical Engineering Conference 2009. p. 241-242 2 p. (IFMBE Proceedings; vol. 24).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ridge-branch-based blood vessel detection algorithm for multimodal retinal images

Li, Y., Hutchings, N., Knighton, R. W., Gregori, G., Lujan, B. J. & Flanagan, J. G., Dec 15 2009, Medical Imaging 2009 - Image Processing. 72594K. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7259).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

7 Scopus citations

Ultra high-resolution optical coherence tomography for ocular imaging of small animals

Ruggeri, M., Jiao, S., Major, J. C., Cebulla, C., Rosenfeld, P., Gregori, G., Tsechpenakis, G., Wang, J., Murray, T. & Porciatti, V., Nov 6 2009, 25th Southern Biomedical Engineering Conference 2009. p. 11-12 2 p. (IFMBE Proceedings; vol. 24).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2008

Automatic retinal blood flow calculation using spectral domain optical coherence tomography

Wehbe, H., Ruggeri, M., Jiao, S., Gregori, G. & Puliafito, C. A., Apr 21 2008, Coherence Domain Optical Methods and Optical Coherence Tomography in Biomedicine XII. 68470I. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6847).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Calibration of blood flow measurement with spectral domain optical coherence tomography

Wehbe, H., Ruggeri, M., Jiao, S., Gregori, G., Puliafito, C. A. & Zhao, W., Dec 1 2008, Biomedical Optics, BIOMED 2008.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Combining femtosecond laser ablation and diode laser welding in lamellar and endothelial corneal transplants

Pini, R., Rossi, F., Matteini, P., Ratto, F., Menabuoni, L., Lenzetti, I., Yoo, S. H. & Parel, J. M., May 26 2008, Ophthalmic Technologies XVIII. 684411. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6844).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Direct visualization of tear film on soft contact lens using ultra-high resolution spectral domain optical coherence tomography

Wang, J., Jiao, S., Ruggeri, M. & Wehbe, H., May 26 2008, Ophthalmic Technologies XVIII. 68441E. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6844).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Geometric deformable model driven by CoCRFs: Application to optical coherence tomography

Tsechpenakis, G., Lujan, B., Martinez, O., Gregori, G. & Rosenfeld, P. J., Dec 1 2008, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2008 - 11th International Conference, Proceedings. PART 1 ed. p. 883-891 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5241 LNCS, no. PART 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

12 Scopus citations

High refractive index polysiloxanes as in-situ curable accommodating implant

Hao, X., Aly, M., Ho, A., Hughes, T. C., Jeffery, J. L., Le, T., Manns, F., Nguyen, X. T. T., Parel, J. M. & Ziebarth, N., Dec 1 2008, 8th World Biomaterials Congress 2008. 1 p. (8th World Biomaterials Congress 2008; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

In vivo imaging of raptor retina with ultra high resolution spectral domain optical coherence tomography

Ruggeri, M., Major, J. C., McKeown, C., Wehbe, H., Jiao, S. & Puliafito, C. A., May 26 2008, Ophthalmic Technologies XVIII. 684402. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6844).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Mechanical properties of intra-ocular lenses

Ehrmann, K., Kim, E. & Parel, J. M., May 26 2008, Ophthalmic Technologies XVIII. 68440O. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6844).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Polysiloxane soft gels as in-situ curable accommodating implant

Hao, X., Donovan, L., Ho, A., Hughes, T. C., Jeffery, J. L., Le, T., Manns, F., Nguyen, X. T. T., Parel, J. M. & Fernandez, V., Dec 1 2008, 8th World Biomaterials Congress 2008. 1 p. (8th World Biomaterials Congress 2008; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ultra high-resolution optical coherence tomography for non-contact ocular imaging of small animals

Ruggeri, M., Wehbe, H., Jiao, S., Wang, J., Jockovich, M. E., Rosenfeld, P. J., Major, J. C., McKeown, C. & Puliafito, C. A., Dec 1 2008, Biomedical Optics, BIOMED 2008.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2007

Automatic retinal blood vessel parameter calculation in spectral domain optical coherence tomography

Wehbe, H., Ruggeri, M., Jiao, S., Gregori, G. & Puliafito, C. A., May 22 2007, Coherence Domain Optical Methods and Optical Coherence Tomography in Biomedicine XI. 64290D. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6429).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Coupling CRFs and deformable models for 3D medical image segmentation

Tsechpenakis, G., Wang, J., Mayer, B. & Metaxas, D., Dec 1 2007, Proceedings of the IEEE International Conference on Computer Vision. 4409151

Research output: Chapter in Book/Report/Conference proceedingConference contribution

12 Scopus citations

CRF-based segmentation of human tear meniscus obtained with optical coherence tomography

Tsechpenakis, G. & Wang, J., Jan 1 2007, 2007 IEEE International Conference on Image Processing, ICIP 2007 Proceedings. IEEE Computer Society, p. V509-V512 4379877. (Proceedings - International Conference on Image Processing, ICIP; vol. 5).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Imaging of eye tumor in the mouse model of retinoblastoma with spectral-domain optical coherence tomography

Shuliang, J., Ruggeri, M., Wehbe, H., Gregory, G., Jockovich, M. E., Hackam, A. & Puliafito, C. A., Aug 31 2007, Ophthalmic Technologies XVII. 64260D. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6426).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Spectral domain optical coherence tomography for in-vivo three dimensional retinal imaging of small animals

Ruggeri, M., Wehbe, H., Jiao, S., Gregori, G., Jockovich, M. E., Hackam, A., Duan, Y. & Puliafito, C. A., May 22 2007, Coherence Domain Optical Methods and Optical Coherence Tomography in Biomedicine XI. 64290S. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6429).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2006

A novel orbital tissue expander (OTE): Design, in-vitro and in-vivo studies

Lee, E., Tse, D., Pinchuk, L., Acosta, A. C., Martin, J. B., Davis, S. B., Hernandez, E., Yamamoto, H., Denham, D. B., Dubovy, S. & Parel, J. M., Jun 30 2006, Ophthalmic Technologies XVI. 61380T. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6138).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Image registration in ophthalmic spectral-domain optical coherence tomography

Jiao, S., Wu, C., Knighton, R., Gregori, G. & Puliafito, C. A., Jan 1 2006, Biomedical Topical Meeting, BIO 2006. Optical Society of America, (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

New styrene-b-isobutylene-b-styrene (SIBS) glaucoma drainage implant

Orozco, M., Acosta, A. C., Espana, E. M., Pinchuk, L., Weber, B., Davis, S., Arrieta, E., Dubovy, S., Fantes, F., Aly, M., Zhou, Y. & Parel, J. M., Jun 30 2006, Ophthalmic Technologies XVI. 61380U. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6138).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Preliminary study on the closure of the lens capsule by laser welding

Pini, R., Rossi, F., Menabuoni, L., Lenzetti, I., Rossi, G. & Parel, J. M., Jun 30 2006, Ophthalmic Technologies XVI. 61381C. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6138).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Treatment of retinal detachment with an encircling band and buckle implant: A comparative pilot study between poly (styrene-b-isobutylene-b-styrene) (SIBS) and trimethyl terminated polydimethylsiloxane (PDMS)

Aguilar, M., Yamamoto, H., Espana, E., Acosta, A. C., Orozco, M., Aly, M., Arrieta, E., Hernandez, E., Martin, J., Dubovy, S., Smiddy, W., Pinchuk, L. & Parel, J. M., Jun 30 2006, Ophthalmic Technologies XVI. 61381S. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6138).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1996

Evaluation of the smoothness and accuracy of scanning photorefractive keratectomy on PMMA by optical profilometry

Manns, F., Rol, P. O., Parel, J. M., Schmid, A., Shen, J. H., Matsui, T. & Soderberg, P. G. M. D., Jan 1 1996, Proceedings of SPIE - The International Society for Optical Engineering. Parel, J-M., Joos, K. M. & Rol, P. O. (eds.). p. 57-60 4 p. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 2673).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Mathematical modeling of laser-induced transsclerar ocular hypothermia

Comander, J., Parel, J. M., Robinson, D. S. M. D., Manns, F., Denham, D. B., Rol, P. O. & Murray, T., Jan 1 1996, Proceedings of SPIE - The International Society for Optical Engineering. Parel, J-M., Joos, K. M. & Rol, P. O. (eds.). p. 102-107 6 p. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 2673).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Model development of laser fiber optic endoablative treatment for primary breast cancer

Robinson, D. S. M. D., Parel, J. M., Denham, D. B., Manns, F., Gonzalez-Cirre, X., Schachner, R. M. D., Herron, A. M. D. & Burdette, E. C., Jan 1 1996, Proceedings of SPIE - The International Society for Optical Engineering. Anderson, R. R. (ed.). p. 142-145 4 p. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 2671).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations